Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative amino acid permease | SAMEA3472147_02561 | Not Available | Negative | 2686682 - 2687731 | 38178.4 |
| major facilitator superfamily protein | SAMEA3472147_02562 | Not Available | Negative | 2687941 - 2689089 | 41462.2 |
| protein ycac | SAMEA3472147_02563 | Not Available | Positive | 2689404 - 2690030 | 23089.5 |
| anaerobic dimethyl sulfoxide reductase subunit c | SAMEA3472147_02564 | Not Available | Negative | 2690066 - 2690929 | 30892.2 |
| anaerobic dimethyl sulfoxide reductase subunit b | SAMEA3472147_02565 | Not Available | Negative | 2690931 - 2691548 | 22870.1 |
| anaerobic dimethyl sulfoxide reductase chain a | SAMEA3472147_02566 | Not Available | Negative | 2691559 - 2692797 | 46436.5 |
| anaerobic dimethyl sulfoxide reductase chain a | SAMEA3472147_02567 | Not Available | Negative | 2692782 - 2694002 | 44658.2 |
| seryl-trna synthetase | SAMEA3472147_02569 | Not Available | Negative | 2694241 - 2695533 | 48416.8 |
| putative atpase | SAMEA3472147_02570 | Not Available | Negative | 2695624 - 2696967 | 49671.9 |
| outer-membrane lipoprotein carrier protein | SAMEA3472147_02571 | Not Available | Negative | 2696978 - 2697589 | 22498.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





