Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase-2 large subunit | SAMEA3472147_02510 | Not Available | Negative | 2636037 - 2637740 | 62549.7 |
| ni/fe-hydrogenase 2 b-type cytochrome subunit | SAMEA3472147_02511 | Not Available | Negative | 2637737 - 2638915 | 43604.6 |
| hydrogenase-2 subunit | SAMEA3472147_02512 | Not Available | Negative | 2638905 - 2639891 | 36017.0 |
| hydrogenase-2 small chain | SAMEA3472147_02513 | Not Available | Negative | 2639894 - 2641012 | 39654.3 |
| protein | SAMEA3472147_02514 | Not Available | Negative | 2641201 - 2641488 | 10946.1 |
| hydrolase | SAMEA3472147_02515 | Not Available | Negative | 2641607 - 2642494 | 32612.7 |
| putative aldo/keto reductase | SAMEA3472147_02516 | Not Available | Positive | 2642651 - 2643691 | 38817.3 |
| inner membrane protein | SAMEA3472147_02517 | Not Available | Negative | 2643731 - 2644225 | 18642.3 |
| oxidoreductase | SAMEA3472147_02518 | Not Available | Positive | 2644416 - 2645300 | 31489.8 |
| biopolymer transport protein | SAMEA3472147_02519 | Not Available | Negative | 2645572 - 2645997 | 15527.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





