Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator | SAMEA3472147_02490 | Not Available | Negative | 2616606 - 2617748 | 43439.8 |
| amp-binding protein | SAMEA3472147_02491 | Not Available | Positive | 2618119 - 2619840 | 63140.5 |
| putative epimerase | SAMEA3472147_02492 | Not Available | Positive | 2619837 - 2620751 | 33523.2 |
| putative acyl carrier protein | SAMEA3472147_02493 | Not Available | Positive | 2620783 - 2621031 | 9516.83 |
| putative aminotransferase | SAMEA3472147_02494 | Not Available | Positive | 2621031 - 2622203 | 41725.1 |
| putative permease | SAMEA3472147_02495 | Not Available | Negative | 2622238 - 2623317 | 39762.4 |
| putative permease | SAMEA3472147_02496 | Not Available | Negative | 2623314 - 2624384 | 39910.2 |
| transcriptional regulator | SAMEA3472147_02497 | Not Available | Negative | 2624415 - 2624975 | 20716.1 |
| ybl138 | SAMEA3472147_02498 | Not Available | Negative | 2624987 - 2625811 | 32072.8 |
| membrane protein, conserved protein | SAMEA3472147_02499 | Not Available | Negative | 2625811 - 2627160 | 48710.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





