Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flp pilus assembly protein, protease cpaa | SAMEA3472147_02479 | Not Available | Negative | 2604268 - 2604711 | 16151.7 |
| flp pilus assembly protein, pilin flp | SAMEA3472147_02480 | Not Available | Negative | 2604800 - 2605036 | 8365.05 |
| uncharacterised protein | SAMEA3472147_02481 | Not Available | Negative | 2605171 - 2605776 | 22994.2 |
| glycolate permease | SAMEA3472147_02482 | Not Available | Negative | 2607160 - 2608842 | 58923.7 |
| malate synthase g | SAMEA3472147_02484 | Not Available | Negative | 2609197 - 2611368 | 80507.2 |
| protein glcg | SAMEA3472147_02485 | Not Available | Negative | 2611390 - 2611794 | 13737.5 |
| glycolate oxidase iron-sulfur subunit | SAMEA3472147_02486 | Not Available | Negative | 2611799 - 2613022 | 45043.6 |
| glycolate oxidase subunit | SAMEA3472147_02487 | Not Available | Negative | 2613033 - 2614085 | 38248.1 |
| glycolate oxidase subunit | SAMEA3472147_02488 | Not Available | Negative | 2614085 - 2615584 | 53830.9 |
| dna-binding transcriptional regulator glcc | SAMEA3472147_02489 | Not Available | Positive | 2615835 - 2616599 | 28858.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





