Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative periplasmic ferric iron-binding protein | SAMEA3472147_02469 | Not Available | Negative | 2593810 - 2594841 | 37432.6 |
| putative regulatory protein | SAMEA3472147_02470 | Not Available | Negative | 2594838 - 2596142 | 47854.4 |
| putative sensor histidine protein kinase (uhpb-like) | SAMEA3472147_02471 | Not Available | Negative | 2596227 - 2597768 | 57993.8 |
| putative response regulator | SAMEA3472147_02472 | Not Available | Negative | 2597768 - 2598397 | 22813.6 |
| taurine transporter subunit taua | SAMEA3472147_02473 | Not Available | Positive | 2598700 - 2598801 | 3443.16 |
| taurine transporter substrate binding subunit | SAMEA3472147_02474 | Not Available | Positive | 2598856 - 2599662 | 28957.7 |
| taurine abc transporter atp-binding protein | SAMEA3472147_02475 | Not Available | Positive | 2599675 - 2600442 | 28336.6 |
| taurine abc transporter permease | SAMEA3472147_02476 | Not Available | Positive | 2600439 - 2601266 | 29655.6 |
| alpha-ketoglutarate-dependent taurine dioxygenase | SAMEA3472147_02477 | Not Available | Positive | 2601263 - 2602114 | 32411.2 |
| delta-aminolevulinic acid dehydratase | SAMEA3472147_02478 | Not Available | Negative | 2602221 - 2603195 | 35626.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





