Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-4-pentenoate hydratase | SAMEA3472147_02459 | Not Available | Positive | 2583181 - 2583990 | 28875.5 |
| acetaldehyde dehydrogenase | SAMEA3472147_02460 | Not Available | Positive | 2583987 - 2584937 | 33618.6 |
| 4-hydroxy-2-oxovalerate aldolase | SAMEA3472147_02461 | Not Available | Positive | 2584934 - 2585947 | 36442.6 |
| transport protein | SAMEA3472147_02462 | Not Available | Positive | 2586123 - 2587334 | 41555.4 |
| nucleoprotein/polynucleotide-associated enzyme | SAMEA3472147_02463 | Not Available | Positive | 2587436 - 2587975 | 19951.9 |
| putative esterase | SAMEA3472147_02464 | Not Available | Negative | 2588100 - 2588933 | 31422.1 |
| alcohol dehydrogenase | SAMEA3472147_02465 | Not Available | Negative | 2589026 - 2590135 | 39335.2 |
| regulator protein frmr | SAMEA3472147_02466 | Not Available | Negative | 2590170 - 2590445 | 10318.3 |
| fe(3+) ions import atp-binding protein fbpc | SAMEA3472147_02467 | Not Available | Negative | 2590605 - 2591651 | 39102.0 |
| permease component of transport system for ferric iron | SAMEA3472147_02468 | Not Available | Negative | 2591663 - 2593741 | 76000.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





