Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase | SAMEA3472147_02379 | Not Available | Positive | 2494096 - 2494752 | 25546.6 |
| tyrosyl-trna synthetase | SAMEA3472147_02380 | Not Available | Positive | 2494881 - 2496155 | 47529.6 |
| pyridoxamine kinase | SAMEA3472147_02381 | Not Available | Positive | 2496217 - 2497077 | 31218.9 |
| glutathione s-transferase | SAMEA3472147_02382 | Not Available | Negative | 2497121 - 2497726 | 22886.6 |
| tripeptide transporter permease | SAMEA3472147_02383 | Not Available | Negative | 2497832 - 2499334 | 54008.4 |
| uncharacterised protein | SAMEA3472147_02384 | Not Available | Negative | 2499617 - 2499817 | 7922.84 |
| endonuclease iii | SAMEA3472147_02385 | Not Available | Negative | 2499945 - 2500580 | 23533.7 |
| electron transport complex protein | SAMEA3472147_02386 | Not Available | Negative | 2500580 - 2501275 | 24490.6 |
| electron transport complex protein | SAMEA3472147_02387 | Not Available | Negative | 2501279 - 2501899 | 21913.1 |
| electron transport complex protein | SAMEA3472147_02388 | Not Available | Negative | 2501903 - 2502961 | 38158.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





