Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative cii repressor | SAMEA3472147_04460 | Not Available | Positive | 4582741 - 4583166 | 16045.3 |
| Hypothetical protein | SAMEA3472147_04461 | Not Available | Positive | 4583238 - 4584278 | 38555.0 |
| Replication protein 14 | SAMEA3472147_04462 | Not Available | Positive | 4584271 - 4584732 | 17860.5 |
| Hypothetical protein | SAMEA3472147_04463 | Not Available | Positive | 4584766 - 4585179 | 15342.5 |
| uncharacterised protein | SAMEA3472147_04464 | Not Available | Positive | 4585176 - 4585280 | 3867.22 |
| Hypothetical protein | SAMEA3472147_04465 | Not Available | Positive | 4585277 - 4585501 | 8219.14 |
| Hypothetical protein | SAMEA3472147_04466 | Not Available | Positive | 4585498 - 4585806 | 11796.6 |
| Gp58 | SAMEA3472147_04467 | Not Available | Positive | 4585803 - 4586099 | 11097.6 |
| pyrimidine utilization protein b | SAMEA3472147_04468 | Not Available | Negative | 4586360 - 4586944 | 21888.7 |
| Hypothetical protein | SAMEA3472147_04470 | Not Available | Positive | 4587961 - 4589010 | 39272.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





