Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative fe-s protein | SAMEA3472147_02369 | Not Available | Positive | 2486185 - 2486424 | 9359.15 |
| putative aldo/keto reductase | SAMEA3472147_02370 | Not Available | Positive | 2486473 - 2487369 | 33677.6 |
| superoxide dismutase | SAMEA3472147_02371 | Not Available | Positive | 2487450 - 2487971 | 17682.0 |
| putative efflux pump protein | SAMEA3472147_02372 | Not Available | Negative | 2487972 - 2489984 | 75271.0 |
| hlyd-family secretion protein | SAMEA3472147_02373 | Not Available | Negative | 2489984 - 2490841 | 31558.7 |
| inner membrane protein | SAMEA3472147_02374 | Not Available | Negative | 2490844 - 2491080 | 8891.33 |
| transcriptional regulator slya | SAMEA3472147_02375 | Not Available | Positive | 2491281 - 2491715 | 16354.0 |
| outer membrane lipoprotein | SAMEA3472147_02376 | Not Available | Negative | 2491761 - 2492228 | 15602.7 |
| anhydro-n-acetylmuramic acid kinase | SAMEA3472147_02377 | Not Available | Positive | 2492501 - 2493610 | 39556.7 |
| putative lipoprotein | SAMEA3472147_02378 | Not Available | Positive | 2493714 - 2494037 | 12343.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





