Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative oxidoreductase subunit | SAMEA3472147_02347 | Not Available | Positive | 2462597 - 2463361 | 27447.9 |
| conserved protein with fad/nad(p)-binding domain | SAMEA3472147_02348 | Not Available | Negative | 2463373 - 2464977 | 60801.6 |
| Trna-val | Not Available | Not Available | Positive | 2465516 - 2465592 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 2465597 - 2465673 | Not Available |
| fluffing protein | SAMEA3472147_02352 | Not Available | Positive | 2465981 - 2467237 | 42865.7 |
| multidrug resistance protein | SAMEA3472147_02353 | Not Available | Negative | 2467278 - 2468651 | 49480.2 |
| riboflavin synthase subunit alpha | SAMEA3472147_02354 | Not Available | Positive | 2468866 - 2469507 | 23446.3 |
| cyclopropane-fatty-acyl-phospholipid synthase | SAMEA3472147_02355 | Not Available | Negative | 2469547 - 2470695 | 43911.3 |
| major facilitator superfamily protein | SAMEA3472147_02356 | Not Available | Negative | 2470986 - 2472197 | 43399.9 |
| lysr family transcriptional regulator | SAMEA3472147_02357 | Not Available | Positive | 2472310 - 2473242 | 35251.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





