Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfuration protein | SAMEA3472147_02337 | Not Available | Positive | 2452817 - 2453233 | 15787.2 |
| putative peptidoglycan-binding protein | SAMEA3472147_02338 | Not Available | Positive | 2453382 - 2454386 | 36070.4 |
| murein lipoprotein | SAMEA3472147_02339 | Not Available | Negative | 2454450 - 2454686 | 8323.95 |
| pyruvate kinase | SAMEA3472147_02340 | Not Available | Negative | 2454997 - 2456409 | 50732.5 |
| protein | SAMEA3472147_02341 | Not Available | Positive | 2456966 - 2457175 | 7907.85 |
| putative oxidoreductase fe-s subunit | SAMEA3472147_02342 | Not Available | Positive | 2457814 - 2458257 | 16032.2 |
| putative aldehyde ferredoxin oxidoreductase | SAMEA3472147_02343 | Not Available | Positive | 2458278 - 2460380 | 77908.8 |
| putative oxidoreductase subunit | SAMEA3472147_02344 | Not Available | Positive | 2460393 - 2461031 | 24095.3 |
| putative oxidoreductase fe-s subunit | SAMEA3472147_02345 | Not Available | Positive | 2461095 - 2461763 | 25080.9 |
| putative oxidoreductase, cytochrome b subunit | SAMEA3472147_02346 | Not Available | Positive | 2461760 - 2462545 | 29512.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





