Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMEA3472147_04449 | Not Available | Positive | 4576082 - 4577152 | 38762.2 |
| bifunctional chorismate mutase t and prephenate dehydrogenase | SAMEA3472147_04450 | Not Available | Positive | 4577163 - 4578284 | 42000.9 |
| p-protein | SAMEA3472147_04451 | Not Available | Negative | 4578327 - 4579487 | 43185.9 |
| Attr | Not Available | Not Available | Positive | 4579499 - 4579511 | Not Available |
| Tyrosine-type recombinase/integrase | SAMEA3472147_04453 | Not Available | Negative | 4579799 - 4580155 | 13423.3 |
| Gp33 | SAMEA3472147_04455 | Not Available | Positive | 4580785 - 4581105 | 11856.7 |
| putative prophage protein | SAMEA3472147_04456 | Not Available | Negative | 4581037 - 4581342 | 11695.3 |
| Hypothetical protein | SAMEA3472147_04457 | Not Available | Negative | 4581344 - 4581580 | 8556.93 |
| Prophage repressor | SAMEA3472147_04458 | Not Available | Negative | 4581775 - 4582419 | 23144.2 |
| Prophage anti-repressor | SAMEA3472147_04459 | Not Available | Positive | 4582517 - 4582744 | 8471.05 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





