Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate adenylyltransferase | SAMEA3472147_02223 | Not Available | Negative | 2345465 - 2346373 | 35205.3 |
| alkaline phosphatase isozyme conversion protein | SAMEA3472147_02224 | Not Available | Positive | 2346625 - 2347662 | 37887.3 |
| crispr-associated protein cas2 | SAMEA3472147_02225 | Not Available | Negative | 2348183 - 2348467 | 10506.8 |
| putative crispr-associated protein cas1 | SAMEA3472147_02226 | Not Available | Negative | 2348469 - 2349386 | 33196.4 |
| crispr-associated cse3 family protein | SAMEA3472147_02227 | Not Available | Negative | 2349402 - 2350001 | 22363.4 |
| crispr-associated cas5 family ecoli subtype protein | SAMEA3472147_02228 | Not Available | Negative | 2349988 - 2350662 | 25270.3 |
| crispr-associated cse4 family protein | SAMEA3472147_02229 | Not Available | Negative | 2350665 - 2351690 | 37602.9 |
| nad-dependent deacetylase | SAMEA3472147_02230 | Not Available | Negative | 2352347 - 2353168 | 30938.2 |
| n-acetyl-d-glucosamine kinase | SAMEA3472147_02231 | Not Available | Negative | 2353184 - 2354095 | 33081.6 |
| lipoprotein-releasing system transmembrane protein | SAMEA3472147_02232 | Not Available | Negative | 2354124 - 2355362 | 45105.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





