Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-l-isoaspartate o-methyltransferase | SAMEA3472147_02213 | Not Available | Negative | 2338936 - 2339562 | 23259.2 |
| stationary phase survival protein sure | SAMEA3472147_02214 | Not Available | Negative | 2339556 - 2340317 | 26902.0 |
| trna pseudouridine synthase d | SAMEA3472147_02215 | Not Available | Negative | 2340298 - 2340765 | 17278.4 |
| trna pseudouridine synthase d | SAMEA3472147_02216 | Not Available | Negative | 2340779 - 2341348 | 20913.1 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SAMEA3472147_02217 | Not Available | Negative | 2341345 - 2341824 | 16845.5 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | SAMEA3472147_02218 | Not Available | Negative | 2341824 - 2342534 | 25752.8 |
| cell division protein | SAMEA3472147_02219 | Not Available | Negative | 2342553 - 2342864 | 11622.7 |
| putative cytochrome oxidase subunit | SAMEA3472147_02220 | Not Available | Negative | 2343058 - 2343381 | 12040.0 |
| adenosine 5-phosphosulfate kinase | SAMEA3472147_02221 | Not Available | Negative | 2343431 - 2344036 | 22322.7 |
| sulfate adenylyltransferase | SAMEA3472147_02222 | Not Available | Negative | 2344036 - 2345463 | 52561.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





