Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein | SAMEA3472147_02203 | Not Available | Negative | 2329657 - 2330010 | 13960.3 |
| uncharacterised protein | SAMEA3472147_02204 | Not Available | Positive | 2330067 - 2330300 | 8663.32 |
| dna mismatch repair protein muts | SAMEA3472147_02205 | Not Available | Positive | 2330297 - 2332858 | 95224.5 |
| serine/threonine-specific protein phosphatase 2 | SAMEA3472147_02206 | Not Available | Positive | 2332964 - 2333620 | 25091.6 |
| 4-hydroxybenzoate decarboxylase subunit d | SAMEA3472147_02207 | Not Available | Negative | 2333661 - 2333897 | 9180.06 |
| 4-hydroxybenzoate decarboxylase subunit c | SAMEA3472147_02208 | Not Available | Negative | 2333908 - 2335335 | 52387.8 |
| 4-hydroxybenzoate decarboxylase subunit b | SAMEA3472147_02209 | Not Available | Negative | 2335335 - 2335928 | 21487.2 |
| regulator | SAMEA3472147_02210 | Not Available | Positive | 2336075 - 2336482 | 15495.8 |
| rna polymerase sigma factor rpos | SAMEA3472147_02211 | Not Available | Negative | 2336602 - 2337594 | 37975.1 |
| lipoprotein nlpd | SAMEA3472147_02212 | Not Available | Negative | 2337657 - 2338796 | 40151.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





