Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase maturation protein hypf | SAMEA3472147_02183 | Not Available | Negative | 2308365 - 2310629 | 82091.8 |
| electron transport protein hydn | SAMEA3472147_02184 | Not Available | Negative | 2310782 - 2311309 | 19027.2 |
| transcriptional regulator | SAMEA3472147_02185 | Not Available | Negative | 2311458 - 2312471 | 36962.6 |
| arbutin-, cellobiose-, and salicin-specific pts system eiibc component | SAMEA3472147_02186 | Not Available | Positive | 2312728 - 2314185 | 51030.1 |
| 6-phospho-beta-glucosidase | SAMEA3472147_02187 | Not Available | Positive | 2314194 - 2315618 | 53819.6 |
| hydrogenase 3 maturation protease | SAMEA3472147_02188 | Not Available | Negative | 2315777 - 2316247 | 17057.6 |
| formate hydrogenlyase maturation protein | SAMEA3472147_02189 | Not Available | Negative | 2316240 - 2316650 | 15465.5 |
| formate hydrogenlyase subunit 7 | SAMEA3472147_02190 | Not Available | Negative | 2316647 - 2317414 | 28015.7 |
| formate hydrogenlyase subunit 6 | SAMEA3472147_02191 | Not Available | Negative | 2317414 - 2317956 | 20329.4 |
| formate hydrogenlyase subunit e | SAMEA3472147_02192 | Not Available | Negative | 2317966 - 2319675 | 64998.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





