Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Inner membrane protein ypjd | SAMEA3472147_04439 | Not Available | Negative | 4568590 - 4569456 | 32145.5 |
| Signal recognition particle protein | SAMEA3472147_04440 | Not Available | Positive | 4569548 - 4570909 | 49790.5 |
| 30s ribosomal protein s16 | SAMEA3472147_04441 | Not Available | Positive | 4571046 - 4571294 | 9177.05 |
| 16s rrna-processing protein rimm | SAMEA3472147_04442 | Not Available | Positive | 4571313 - 4571861 | 20606.6 |
| trna (guanine-1-)-methyltransferase | SAMEA3472147_04443 | Not Available | Positive | 4571892 - 4572659 | 28424.0 |
| 50s ribosomal protein l19 | SAMEA3472147_04444 | Not Available | Positive | 4572701 - 4573048 | 13134.0 |
| outer membrane lipoprotein | SAMEA3472147_04445 | Not Available | Negative | 4573125 - 4573607 | 17325.7 |
| Gp350 | SAMEA3472147_04446 | Not Available | Negative | 4573623 - 4574849 | 46029.2 |
| 156g surface protein | SAMEA3472147_04447 | Not Available | Negative | 4574839 - 4575357 | 18964.2 |
| putative lipoprotein | SAMEA3472147_04448 | Not Available | Negative | 4575507 - 4575869 | 13085.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





