Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleotide reductase stimulatory protein | SAMEA3472147_02142 | Not Available | Positive | 2272146 - 2272556 | 15341.3 |
| ribonucleoside-diphosphate reductase 2 alpha chain | SAMEA3472147_02143 | Not Available | Positive | 2272529 - 2274673 | 80374.4 |
| ribonucleoside-diphosphate reductase 2 beta chain | SAMEA3472147_02144 | Not Available | Positive | 2274683 - 2275642 | 36544.1 |
| glycine betaine/l-proline abc transporter atp-binding protein | SAMEA3472147_02145 | Not Available | Positive | 2275998 - 2277200 | 44165.5 |
| glycine betaine/l-proline abc transporter permease | SAMEA3472147_02146 | Not Available | Positive | 2277193 - 2278257 | 37622.1 |
| glycine betaine/l-proline abc transporter, substrate-binding protein | SAMEA3472147_02147 | Not Available | Positive | 2278314 - 2279306 | 36024.4 |
| major facilitator superfamily protein | SAMEA3472147_02148 | Not Available | Positive | 2279498 - 2280682 | 41686.9 |
| azlc-like membrane protein | SAMEA3472147_02149 | Not Available | Positive | 2280806 - 2281543 | 26099.1 |
| putative inner membrane protein | SAMEA3472147_02150 | Not Available | Positive | 2281533 - 2281868 | 11996.2 |
| marr-family transcriptional repressor | SAMEA3472147_02151 | Not Available | Positive | 2281959 - 2282489 | 20564.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





