Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator | SAMEA3472147_02122 | Not Available | Positive | 2255830 - 2256741 | 34728.6 |
| dna replication/recombination/repair protein | SAMEA3472147_02123 | Not Available | Negative | 2256734 - 2257126 | 14772.8 |
| protein of uncharacterised function (duf2686) | SAMEA3472147_02124 | Not Available | Positive | 2257799 - 2258629 | 30816.8 |
| uxu operon transcriptional regulator | SAMEA3472147_02125 | Not Available | Negative | 2258770 - 2259543 | 29319.9 |
| d-mannonate oxidoreductase, nad-binding | SAMEA3472147_02126 | Not Available | Negative | 2259758 - 2261218 | 53659.3 |
| mannonate dehydratase | SAMEA3472147_02127 | Not Available | Negative | 2261299 - 2262483 | 44821.5 |
| high-affinity gluconate transporter | SAMEA3472147_02128 | Not Available | Positive | 2262823 - 2264166 | 47155.0 |
| uncharacterised protein | SAMEA3472147_02129 | Not Available | Positive | 2264187 - 2264363 | 6113.55 |
| gntr family transcriptional regulator | SAMEA3472147_02130 | Not Available | Positive | 2264892 - 2265554 | 24939.3 |
| putative peptidoglycan-binding protein | SAMEA3472147_02131 | Not Available | Negative | 2265555 - 2266004 | 16064.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





