Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of uncharacterised function (duf3343) | SAMEA3472147_02112 | Not Available | Positive | 2241921 - 2242187 | 9891.88 |
| non-lee-encoded type iii secreted effector | SAMEA3472147_02113 | Not Available | Positive | 2242495 - 2243451 | 36977.6 |
| non-lee-encoded type iii secreted effector | SAMEA3472147_02114 | Not Available | Positive | 2243563 - 2244675 | 41337.9 |
| sdia-regulated protein | SAMEA3472147_02115 | Not Available | Positive | 2244942 - 2245784 | 31434.5 |
| major facilitator family transporter | SAMEA3472147_02116 | Not Available | Positive | 2245852 - 2247030 | 41307.0 |
| invasin | SAMEA3472147_02117 | Not Available | Positive | 2247241 - 2252481 | 188323.0 |
| rna 2'-phosphotransferase-like protein | SAMEA3472147_02118 | Not Available | Negative | 2252605 - 2253189 | 21648.0 |
| putative transporter | SAMEA3472147_02119 | Not Available | Positive | 2253439 - 2254122 | 23794.8 |
| putative transporter | SAMEA3472147_02120 | Not Available | Positive | 2254119 - 2254580 | 16194.5 |
| isoaspartyl dipeptidase | SAMEA3472147_02121 | Not Available | Positive | 2254593 - 2255765 | 41072.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





