Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative type i restriction-modification system, dna-methyltransferase subunit m | SAMEA3472147_02101 | Not Available | Positive | 2226955 - 2228574 | 60591.9 |
| type i restriction modification dna specificity domain-containing protein | SAMEA3472147_02102 | Not Available | Positive | 2228564 - 2229967 | 52523.8 |
| type i restriction-modification system (hsdr-like) | SAMEA3472147_02103 | Not Available | Positive | 2230062 - 2233325 | 124954.0 |
| protein yjis | SAMEA3472147_02105 | Not Available | Negative | 2233921 - 2234085 | 6854.5 |
| fused dna-binding transcriptional regulator | SAMEA3472147_02106 | Not Available | Positive | 2234262 - 2235674 | 53019.7 |
| transposase | SAMEA3472147_02107 | Not Available | Negative | 2235916 - 2236860 | 36744.3 |
| multidrug resistance protein | SAMEA3472147_02108 | Not Available | Positive | 2237327 - 2238559 | 44614.1 |
| inner membrane protein | SAMEA3472147_02109 | Not Available | Positive | 2238600 - 2239880 | 48223.7 |
| 2-hydroxyglutaryl-coa dehydratase | SAMEA3472147_02110 | Not Available | Positive | 2239996 - 2241147 | 42800.4 |
| atpase, activator of (r)-hydroxyglutaryl-coa dehydratase | SAMEA3472147_02111 | Not Available | Positive | 2241157 - 2241924 | 27303.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





