Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| structural protein | SAMEA3472147_02071 | Not Available | Positive | 2194993 - 2195763 | 28002.6 |
| putative inner membrane protein yjjb | SAMEA3472147_02072 | Not Available | Positive | 2195754 - 2196227 | 17081.6 |
| primosomal protein i | SAMEA3472147_02073 | Not Available | Positive | 2196335 - 2196874 | 19518.2 |
| dna replication protein | SAMEA3472147_02074 | Not Available | Positive | 2196877 - 2197614 | 27936.8 |
| putative glycoprotein/receptor | SAMEA3472147_02075 | Not Available | Positive | 2197663 - 2198157 | 17353.6 |
| phosphoglycerol transferase i (phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase) | SAMEA3472147_02076 | Not Available | Positive | 2198411 - 2200702 | 85528.7 |
| putative zinc-binding dehydrogenase | SAMEA3472147_02077 | Not Available | Negative | 2200840 - 2201862 | 36655.2 |
| dna-binding transcriptional regulator | SAMEA3472147_02078 | Not Available | Positive | 2202001 - 2202906 | 35063.0 |
| na(+)/h(+) exchanger yjce | SAMEA3472147_02079 | Not Available | Negative | 2203077 - 2204729 | 60298.8 |
| c4-dicarboxylate-binding protein | SAMEA3472147_02080 | Not Available | Positive | 2205409 - 2206380 | 36282.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





