Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tmrna,resume; | Not Available | Not Available | Positive | 4561388 - 4561750 | Not Available |
| Ssra-binding protein | SAMEA3472147_04431 | Not Available | Negative | 4561965 - 4562447 | 18270.1 |
| Type ii toxin-antitoxin system toxin rata | SAMEA3472147_04432 | Not Available | Positive | 4562579 - 4563055 | 17743.7 |
| Rnfh family protein | SAMEA3472147_04433 | Not Available | Positive | 4563045 - 4563335 | 10790.0 |
| Outer membrane protein assembly factor bame | SAMEA3472147_04434 | Not Available | Negative | 4563397 - 4563738 | 12302.8 |
| Attl | Not Available | Not Available | Positive | 4563418 - 4563430 | Not Available |
| Dna repair protein recn | SAMEA3472147_04435 | Not Available | Negative | 4563887 - 4565548 | 61405.1 |
| Dna repair protein recn | SAMEA3472147_04436 | Not Available | Negative | 4565634 - 4566512 | 32510.3 |
| Heat shock protein | SAMEA3472147_04437 | Not Available | Positive | 4566635 - 4567228 | 21813.1 |
| Hlyc/corc family transporter | SAMEA3472147_04438 | Not Available | Negative | 4567283 - 4568524 | 46353.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





