Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase | SAMEA3472147_01988 | Not Available | Negative | 2117733 - 2119388 | 60720.9 |
| porphyrin biosynthetic protein | SAMEA3472147_01991 | Not Available | Negative | 2120067 - 2121263 | 45247.7 |
| putative uroporphyrinogen iii c-methyltransferase | SAMEA3472147_01992 | Not Available | Negative | 2121266 - 2122459 | 43316.8 |
| uroporphyrinogen iii synthase | SAMEA3472147_01993 | Not Available | Negative | 2122481 - 2123221 | 27784.5 |
| porphobilinogen deaminase | SAMEA3472147_01994 | Not Available | Negative | 2123218 - 2124180 | 34610.0 |
| adenylate cyclase | SAMEA3472147_01995 | Not Available | Positive | 2124546 - 2127092 | 97564.3 |
| putative iron-interacting protein | SAMEA3472147_01996 | Not Available | Negative | 2127132 - 2127452 | 12232.0 |
| lipoprotein | SAMEA3472147_01997 | Not Available | Negative | 2127500 - 2129527 | 77615.1 |
| putative lipoprotein | SAMEA3472147_01998 | Not Available | Positive | 2129716 - 2129919 | 7177.59 |
| diaminopimelate epimerase | SAMEA3472147_01999 | Not Available | Positive | 2129956 - 2130780 | 30210.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





