Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor rho | SAMEA3472147_01968 | Not Available | Positive | 2099789 - 2101048 | 47007.1 |
| uncharacterised protein | SAMEA3472147_01969 | Not Available | Positive | 2101058 - 2101276 | 8200.25 |
| undecaprenyl-phosphate alpha-n-acetylglucosaminyltransferase | SAMEA3472147_01970 | Not Available | Positive | 2101288 - 2102391 | 40959.7 |
| enterobacterial common antigen (eca) polysaccharide chain length modulation protein | SAMEA3472147_01971 | Not Available | Positive | 2102403 - 2103449 | 39491.3 |
| udp-n-acetylglucosamine 2-epimerase | SAMEA3472147_01972 | Not Available | Positive | 2103475 - 2104635 | 43349.4 |
| udp-n-acetyl-d-mannosamine dehydrogenase | SAMEA3472147_01973 | Not Available | Positive | 2104632 - 2105894 | 45841.3 |
| dtdp-glucose 4,6-dehydratase | SAMEA3472147_01974 | Not Available | Positive | 2105894 - 2106961 | 39766.0 |
| glucose-1-phosphate thymidylyltransferase | SAMEA3472147_01975 | Not Available | Positive | 2106980 - 2107861 | 32736.3 |
| tdp-fucosamine acetyltransferase | SAMEA3472147_01976 | Not Available | Positive | 2107839 - 2108513 | 24249.7 |
| dtdp-4-oxo-6-deoxy-d-glucose transaminase | SAMEA3472147_01977 | Not Available | Positive | 2108518 - 2109648 | 41936.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





