Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-hydroxybenzoic acid efflux pump subunit a | SAMEA3472147_01947 | Not Available | Negative | 2078683 - 2079615 | 34762.5 |
| protein aaex | SAMEA3472147_01948 | Not Available | Negative | 2079623 - 2079826 | 7847.01 |
| Trna-asp | Not Available | Not Available | Positive | 2080342 - 2080418 | Not Available |
| Trna-trp | Not Available | Not Available | Positive | 2080427 - 2080502 | Not Available |
| lysr-family transcriptional regulator (h-ns-dependent flhd regulator) | SAMEA3472147_01952 | Not Available | Negative | 2080598 - 2081437 | 31778.0 |
| protein yife | SAMEA3472147_01953 | Not Available | Positive | 2081556 - 2081894 | 13134.2 |
| putative magnesium chelatase | SAMEA3472147_01954 | Not Available | Negative | 2081919 - 2083439 | 55243.6 |
| acetolactate synthase isozyme ii large subunit | SAMEA3472147_01955 | Not Available | Positive | 2084030 - 2085676 | 59128.2 |
| acetolactate synthase isozyme ii small subunit | SAMEA3472147_01956 | Not Available | Positive | 2085673 - 2085936 | 9703.74 |
| branched-chain amino-acid aminotransferase | SAMEA3472147_01957 | Not Available | Positive | 2085956 - 2086885 | 34095.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





