Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative tonb-like membrane protein from phage origin | SAMEA3472147_04419 | Not Available | Negative | 4555130 - 4555456 | 12304.2 |
| uncharacterised protein | SAMEA3472147_04420 | Not Available | Negative | 4555800 - 4556024 | 8214.22 |
| Putative endopeptidase rz | SAMEA3472147_04421 | Not Available | Negative | 4556048 - 4556506 | 17112.4 |
| Hypothetical protein | SAMEA3472147_04422 | Not Available | Negative | 4556518 - 4556649 | 4515.96 |
| Phage antirepressor protein | SAMEA3472147_04423 | Not Available | Negative | 4556744 - 4557439 | 25850.4 |
| Lysozyme protein r | SAMEA3472147_04424 | Not Available | Negative | 4557713 - 4558246 | 19432.3 |
| Hypothetical protein | SAMEA3472147_04425 | Not Available | Negative | 4558297 - 4558641 | 12440.1 |
| Hypothetical protein | SAMEA3472147_04427 | Not Available | Negative | 4559835 - 4560029 | 7172.15 |
| uncharacterised protein | SAMEA3472147_04428 | Not Available | Negative | 4560373 - 4560741 | 14352.1 |
| uncharacterised protein | SAMEA3472147_04429 | Not Available | Negative | 4560744 - 4561205 | 17704.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





