Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l13 | SAMEA3472147_01937 | Not Available | Negative | 2068712 - 2069140 | 16019.5 |
| putative atp/gtp-binding protein | SAMEA3472147_01938 | Not Available | Negative | 2069359 - 2070486 | 43080.1 |
| cytochrome d ubiquinol oxidase subunit iii | SAMEA3472147_01939 | Not Available | Positive | 2070680 - 2071078 | 14961.7 |
| serine endoprotease | SAMEA3472147_01940 | Not Available | Positive | 2071232 - 2072599 | 47222.0 |
| protease | SAMEA3472147_01941 | Not Available | Positive | 2072689 - 2073756 | 37583.4 |
| malate dehydrogenase | SAMEA3472147_01942 | Not Available | Negative | 2073819 - 2074757 | 32339.2 |
| arginine repressor | SAMEA3472147_01943 | Not Available | Positive | 2075192 - 2075662 | 16995.5 |
| protein ycfr | SAMEA3472147_01944 | Not Available | Positive | 2076027 - 2076290 | 9196.89 |
| barnase inhibitor | SAMEA3472147_01945 | Not Available | Negative | 2076346 - 2076618 | 10766.7 |
| p-hydroxybenzoic acid efflux pump subunit b | SAMEA3472147_01946 | Not Available | Negative | 2076710 - 2078677 | 73614.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





