Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l27 | SAMEA3472147_01896 | Not Available | Negative | 2030381 - 2030638 | 9125.01 |
| 50s ribosomal protein l21 | SAMEA3472147_01897 | Not Available | Negative | 2030659 - 2030970 | 11565.0 |
| octaprenyl-diphosphate synthase | SAMEA3472147_01898 | Not Available | Positive | 2031229 - 2032200 | 35218.1 |
| sugar fermentation stimulation protein b | SAMEA3472147_01899 | Not Available | Positive | 2032427 - 2032705 | 10495.6 |
| udp-n-acetylglucosamine l-carboxyvinyltransferase | SAMEA3472147_01900 | Not Available | Negative | 2032753 - 2034012 | 44819.4 |
| bola family transcriptional regulator | SAMEA3472147_01901 | Not Available | Negative | 2034067 - 2034336 | 10038.0 |
| putative anti-sigma factor antagonist | SAMEA3472147_01902 | Not Available | Negative | 2034481 - 2034774 | 10681.0 |
| putative organic solvent tolerance protein | SAMEA3472147_01903 | Not Available | Negative | 2034774 - 2035409 | 23949.9 |
| phospholipid abc transporter substrate-binding protein | SAMEA3472147_01904 | Not Available | Negative | 2035428 - 2035979 | 19577.3 |
| putative organic solvent tolerance protein | SAMEA3472147_01905 | Not Available | Negative | 2035984 - 2036766 | 27865.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





