Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved protein, upf0306 family | SAMEA3472147_01862 | Not Available | Negative | 1997135 - 1997578 | 16807.2 |
| giy-yig nuclease superfamily protein | SAMEA3472147_01863 | Not Available | Positive | 1997629 - 1997931 | 11242.5 |
| putative acetyltransferase | SAMEA3472147_01864 | Not Available | Negative | 1997918 - 1998421 | 18534.8 |
| sterol-binding protein | SAMEA3472147_01865 | Not Available | Negative | 1998415 - 1998939 | 19673.0 |
| protease yhbu | SAMEA3472147_01866 | Not Available | Positive | 1999148 - 2000143 | 37044.2 |
| putative peptidase | SAMEA3472147_01867 | Not Available | Positive | 2000152 - 2001030 | 32592.2 |
| monooxygenase | SAMEA3472147_01868 | Not Available | Positive | 2001111 - 2002118 | 37131.4 |
| tryptophan-specific transport protein | SAMEA3472147_01869 | Not Available | Negative | 2002236 - 2003480 | 44335.2 |
| atp-dependent rna helicase (dead-box protein) | SAMEA3472147_01870 | Not Available | Negative | 2003634 - 2005523 | 70580.6 |
| lipoprotein nlpi precursor | SAMEA3472147_01871 | Not Available | Negative | 2005703 - 2006587 | 33622.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





