Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybl68 | SAMEA3472147_01852 | Not Available | Positive | 1989320 - 1989766 | 17261.9 |
| phage n15 gp48-like protein | SAMEA3472147_01853 | Not Available | Positive | 1989790 - 1990092 | 11119.5 |
| putative methyltransferase | SAMEA3472147_01854 | Not Available | Negative | 1990135 - 1990998 | 31478.8 |
| lipoprotein | SAMEA3472147_01855 | Not Available | Positive | 1991063 - 1993099 | 72813.3 |
| endonuclease-like protein | SAMEA3472147_01856 | Not Available | Positive | 1993057 - 1993452 | 14798.5 |
| dnaa initiator-associating protein diaa | SAMEA3472147_01857 | Not Available | Positive | 1993472 - 1994062 | 21107.3 |
| putative phospholipid-binding protein | SAMEA3472147_01858 | Not Available | Positive | 1994072 - 1994647 | 20029.1 |
| permease | SAMEA3472147_01859 | Not Available | Negative | 1994761 - 1995801 | 37257.9 |
| nucleoside-diphosphate-sugar epimerase | SAMEA3472147_01860 | Not Available | Negative | 1995874 - 1996509 | 23197.3 |
| putative general stress protein | SAMEA3472147_01861 | Not Available | Positive | 1996637 - 1997155 | 18833.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





