Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter transmembrane protein | SAMEA3472147_01841 | Not Available | Positive | 1979700 - 1981016 | 47044.5 |
| tetr-family transcriptional regulator | SAMEA3472147_01842 | Not Available | Positive | 1981066 - 1981770 | 26554.9 |
| inner membrane protein | SAMEA3472147_01843 | Not Available | Positive | 1981770 - 1982129 | 13024.3 |
| trna (uracil-5)-methyltransferase | SAMEA3472147_01844 | Not Available | Negative | 1982169 - 1983269 | 41911.3 |
| vitamin b12/cobalamin outer membrane transporter | SAMEA3472147_01846 | Not Available | Positive | 1983638 - 1985482 | 68353.6 |
| glutamate racemase | SAMEA3472147_01847 | Not Available | Positive | 1985427 - 1986284 | 31075.8 |
| n-acetylgalactosamine-specific pts system eiic component 1 | SAMEA3472147_01848 | Not Available | Positive | 1986931 - 1987254 | 11081.0 |
| pts system n-acetylgalactosamine-specific transporter subunit iic | SAMEA3472147_01849 | Not Available | Positive | 1987294 - 1987734 | 15856.4 |
| pts system n-acetylgalactosamine-specific transporter subunit iid | SAMEA3472147_01850 | Not Available | Positive | 1987724 - 1988515 | 29029.2 |
| putative galactosamine-6-phosphate isomerase | SAMEA3472147_01851 | Not Available | Positive | 1988570 - 1989283 | 26478.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





