Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Bacteriophage head-tail adaptor | SAMEA3472147_04409 | Not Available | Negative | 4546398 - 4546748 | 12645.4 |
| Hypothetical protein | SAMEA3472147_04410 | Not Available | Negative | 4546758 - 4547084 | 12155.9 |
| Putative portal protein | SAMEA3472147_04411 | Not Available | Negative | 4547081 - 4548304 | 44462.5 |
| Putative phage portal protein | SAMEA3472147_04412 | Not Available | Negative | 4548301 - 4549665 | 50688.2 |
| Hypothetical protein | SAMEA3472147_04413 | Not Available | Negative | 4549611 - 4549832 | 8231.75 |
| Putative major head protein/prohead proteinase | SAMEA3472147_04414 | Not Available | Negative | 4549877 - 4551814 | 69072.9 |
| Putative phage terminase-like protein large subunit | SAMEA3472147_04415 | Not Available | Negative | 4551878 - 4553539 | 61004.3 |
| Putative phage terminase | SAMEA3472147_04416 | Not Available | Negative | 4553536 - 4554099 | 20337.4 |
| Hypothetical protein | SAMEA3472147_04417 | Not Available | Negative | 4554391 - 4554756 | 13418.2 |
| Hypothetical protein | SAMEA3472147_04418 | Not Available | Positive | 4554798 - 4554998 | 7620.09 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





