Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator cytr | SAMEA3472147_01810 | Not Available | Negative | 1940925 - 1941950 | 37850.1 |
| primosome assembly protein pria | SAMEA3472147_01811 | Not Available | Negative | 1942106 - 1944304 | 81690.7 |
| 50s ribosomal protein l31 | SAMEA3472147_01812 | Not Available | Positive | 1944507 - 1944719 | 7871.49 |
| peptidoglycan peptidase | SAMEA3472147_01813 | Not Available | Negative | 1944780 - 1945388 | 23247.0 |
| transcriptional repressor protein metj | SAMEA3472147_01814 | Not Available | Negative | 1945448 - 1945765 | 12141.4 |
| cystathionine gamma-synthase | SAMEA3472147_01815 | Not Available | Positive | 1946042 - 1947202 | 41552.8 |
| bifunctional aspartokinase/homoserine dehydrogenase ii] | SAMEA3472147_01816 | Not Available | Positive | 1947205 - 1949637 | 88882.7 |
| 5,10-methylenetetrahydrofolate reductase | SAMEA3472147_01817 | Not Available | Positive | 1949986 - 1950876 | 33104.5 |
| uncharacterised protein | SAMEA3472147_01818 | Not Available | Positive | 1950934 - 1951110 | 6598.1 |
| peroxidase/catalase hpi | SAMEA3472147_01819 | Not Available | Positive | 1951204 - 1953384 | 80029.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





