Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphofructokinase | SAMEA3472147_01790 | Not Available | Positive | 1923514 - 1924476 | 34844.2 |
| sulfate-binding protein (sulfate starvation-induced protein 2) | SAMEA3472147_01791 | Not Available | Positive | 1924795 - 1925784 | 36691.2 |
| cdp-diacylglycerol pyrophosphatase | SAMEA3472147_01792 | Not Available | Positive | 1925891 - 1926646 | 28424.4 |
| triosephosphate isomerase | SAMEA3472147_01793 | Not Available | Negative | 1926701 - 1927468 | 27003.4 |
| protein of uncharacterised function (duf1454) | SAMEA3472147_01794 | Not Available | Negative | 1927576 - 1928175 | 21736.1 |
| inner membrane protein | SAMEA3472147_01795 | Not Available | Positive | 1928276 - 1928716 | 16541.6 |
| conserved protein, upf0381 family | SAMEA3472147_01796 | Not Available | Positive | 1928928 - 1929227 | 10776.7 |
| universal stress protein d | SAMEA3472147_01797 | Not Available | Positive | 1929254 - 1929682 | 16276.9 |
| ferredoxin--nadp reductase | SAMEA3472147_01798 | Not Available | Negative | 1929687 - 1930433 | 27728.5 |
| fructose 1,6-bisphosphatase ii | SAMEA3472147_01799 | Not Available | Negative | 1930530 - 1931540 | 35854.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





