Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructose-specific phosphotransferase system protein frvx | SAMEA3472147_01770 | Not Available | Negative | 1904196 - 1905266 | 38581.5 |
| pts system subunit iic | SAMEA3472147_01771 | Not Available | Negative | 1905256 - 1906707 | 51171.6 |
| fructose-like phosphotransferase system subunit eiia | SAMEA3472147_01772 | Not Available | Negative | 1906718 - 1907164 | 16160.5 |
| putative porin | SAMEA3472147_01773 | Not Available | Positive | 1907642 - 1909036 | 52036.4 |
| l-rhamnose mutarotase | SAMEA3472147_01774 | Not Available | Negative | 1909077 - 1909391 | 12293.6 |
| rhamnulose-1-phosphate aldolase | SAMEA3472147_01775 | Not Available | Negative | 1909401 - 1910225 | 30128.2 |
| l-rhamnose isomerase | SAMEA3472147_01776 | Not Available | Negative | 1910676 - 1911935 | 47286.1 |
| rhamnulokinase | SAMEA3472147_01777 | Not Available | Negative | 1911932 - 1913401 | 54084.2 |
| l-rhamnose operon regulatory protein | SAMEA3472147_01778 | Not Available | Positive | 1913689 - 1914525 | 32317.2 |
| transcriptional activator rhar | SAMEA3472147_01779 | Not Available | Positive | 1914509 - 1915447 | 35712.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





