Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide core biosynthesis protein | SAMEA3472147_01749 | Not Available | Positive | 1881995 - 1882687 | 27011.8 |
| udp-galactose:(galactosyl) lps alpha1,2-galactosyltransferase waaw | SAMEA3472147_01750 | Not Available | Positive | 1882713 - 1883741 | 39402.8 |
| dethiobiotin synthetase | SAMEA3472147_01751 | Not Available | Positive | 1883773 - 1884546 | 30599.4 |
| lipid a-core surface polymer ligase waal | SAMEA3472147_01752 | Not Available | Positive | 1884581 - 1885834 | 47358.2 |
| lipopolysaccharide heptosyltransferase 1 | SAMEA3472147_01753 | Not Available | Negative | 1885882 - 1886841 | 35543.9 |
| adp-heptose--lps-heptosyltransferase ii | SAMEA3472147_01754 | Not Available | Negative | 1886845 - 1887891 | 39016.4 |
| adp-glyceromanno-heptose 6-epimerase rfad | SAMEA3472147_01755 | Not Available | Negative | 1887901 - 1888833 | 34896.0 |
| 2-amino-3-ketobutyrate coenzyme a ligase | SAMEA3472147_01756 | Not Available | Positive | 1889047 - 1890243 | 43131.6 |
| threonine 3-dehydrogenase nad(p)-binding protein | SAMEA3472147_01757 | Not Available | Positive | 1890253 - 1891278 | 37257.3 |
| uncharacterised protein | SAMEA3472147_01758 | Not Available | Positive | 1891824 - 1892939 | 41032.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





