Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail component | SAMEA3472147_04399 | Not Available | Negative | 4538489 - 4539070 | 20180.5 |
| Putative tail fiber component | SAMEA3472147_04400 | Not Available | Negative | 4539067 - 4539810 | 28294.5 |
| Putative tail protein | SAMEA3472147_04401 | Not Available | Negative | 4539821 - 4540519 | 25828.4 |
| Putative minor tail protein | SAMEA3472147_04402 | Not Available | Negative | 4540519 - 4540860 | 13327.9 |
| Putative tail component | SAMEA3472147_04403 | Not Available | Negative | 4540853 - 4544095 | 115959.0 |
| Phage tail protein | SAMEA3472147_04404 | Not Available | Negative | 4544143 - 4544352 | 7604.94 |
| Putative tail assembly protein | SAMEA3472147_04405 | Not Available | Negative | 4544448 - 4544822 | 14036.8 |
| Putative tail protein | SAMEA3472147_04406 | Not Available | Negative | 4544837 - 4545553 | 25335.8 |
| Putative minor tail protein | SAMEA3472147_04407 | Not Available | Negative | 4545614 - 4545958 | 12547.0 |
| Putative structural component | SAMEA3472147_04408 | Not Available | Negative | 4545955 - 4546401 | 16656.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





