Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transport protein | SAMEA3472147_01698 | Not Available | Negative | 1820045 - 1820161 | 4455.15 |
| adenine deaminase | SAMEA3472147_01699 | Not Available | Negative | 1820241 - 1822007 | 63731.2 |
| putative permease | SAMEA3472147_01700 | Not Available | Positive | 1822182 - 1823516 | 46998.6 |
| protein of uncharacterised function (duf1198) | SAMEA3472147_01701 | Not Available | Positive | 1823569 - 1824021 | 17220.1 |
| putative regulatory protein | SAMEA3472147_01702 | Not Available | Negative | 1824137 - 1824460 | 11625.2 |
| uncharacterized protein conserved in bacteria | SAMEA3472147_01703 | Not Available | Negative | 1824444 - 1824803 | 13769.5 |
| ribonucleoside transporter | SAMEA3472147_01704 | Not Available | Positive | 1824983 - 1826215 | 43459.5 |
| putative invasin | SAMEA3472147_01705 | Not Available | Positive | 1826417 - 1837258 | 375835.0 |
| transcriptional regulator | SAMEA3472147_01706 | Not Available | Negative | 1837310 - 1839007 | 63988.0 |
| putative cell invasion type iii effector protein | SAMEA3472147_01707 | Not Available | Negative | 1839210 - 1840559 | 50126.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





