Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensory histidine kinase uhpb | SAMEA3472147_01688 | Not Available | Positive | 1808858 - 1810360 | 56327.3 |
| major facilitator superfamily protein | SAMEA3472147_01689 | Not Available | Positive | 1810370 - 1811689 | 48233.4 |
| hexosephosphate transport protein | SAMEA3472147_01690 | Not Available | Positive | 1811827 - 1813218 | 50609.6 |
| protein of uncharacterised function (duf1198) | SAMEA3472147_01691 | Not Available | Positive | 1813335 - 1813787 | 17451.5 |
| outer membrane porin | SAMEA3472147_01692 | Not Available | Negative | 1813806 - 1815185 | 50560.7 |
| chitobiose/cellobiose phosphotransferase enzyme iia component | SAMEA3472147_01693 | Not Available | Negative | 1815385 - 1815687 | 11388.7 |
| glycosyl phosphatase | SAMEA3472147_01694 | Not Available | Negative | 1815684 - 1817081 | 53780.2 |
| pts system cellobiose/chitosan transporter subunit iic | SAMEA3472147_01695 | Not Available | Negative | 1817102 - 1818433 | 48323.3 |
| pts system cellobiose/chitosan transporter subunit iib | SAMEA3472147_01696 | Not Available | Negative | 1818446 - 1818760 | 11428.2 |
| laci family transcriptional regulator | SAMEA3472147_01697 | Not Available | Positive | 1819016 - 1820008 | 36488.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





