Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator | SAMEA3472147_01677 | Not Available | Positive | 1800002 - 1800499 | 19298.0 |
| multidrug resistance protein d | SAMEA3472147_01678 | Not Available | Negative | 1800507 - 1801691 | 42197.4 |
| toxic peptide tisb | SAMEA3472147_01679 | Not Available | Negative | 1801971 - 1802060 | 3195.29 |
| acetolactate synthase isozyme i large subunit | SAMEA3472147_01681 | Not Available | Positive | 1802829 - 1804517 | 60440.2 |
| acetolactate synthase isozyme i small subunit | SAMEA3472147_01682 | Not Available | Positive | 1804521 - 1804811 | 11106.4 |
| uncharacterised protein | SAMEA3472147_01683 | Not Available | Positive | 1805073 - 1806368 | 48458.8 |
| uncharacterised protein | SAMEA3472147_01684 | Not Available | Positive | 1806485 - 1806652 | 6594.04 |
| uncharacterised protein | SAMEA3472147_01685 | Not Available | Positive | 1806660 - 1807100 | 16996.5 |
| uncharacterised protein | SAMEA3472147_01686 | Not Available | Positive | 1807226 - 1808107 | 33340.0 |
| two-component system response regulator | SAMEA3472147_01687 | Not Available | Positive | 1808268 - 1808858 | 20890.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





