Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide export protein | SAMEA3472147_01667 | Not Available | Negative | 1790141 - 1791280 | 41743.2 |
| putative lipoprotein | SAMEA3472147_01668 | Not Available | Negative | 1791326 - 1793422 | 78675.2 |
| group 4 capsule (g4c) polysaccharide, ymcb | SAMEA3472147_01669 | Not Available | Negative | 1793422 - 1794168 | 27297.6 |
| outer membrane lipoprotein | SAMEA3472147_01670 | Not Available | Negative | 1794165 - 1794743 | 21833.9 |
| dna-binding transcriptional regulator | SAMEA3472147_01671 | Not Available | Negative | 1795039 - 1795329 | 10837.2 |
| putative sodium:solute symporter | SAMEA3472147_01672 | Not Available | Positive | 1795496 - 1797211 | 62040.6 |
| putative sulfatase | SAMEA3472147_01673 | Not Available | Positive | 1797208 - 1798701 | 57240.3 |
| inner membrane protein | SAMEA3472147_01674 | Not Available | Negative | 1798748 - 1799197 | 15729.8 |
| inner membrane protein | SAMEA3472147_01675 | Not Available | Positive | 1799306 - 1799653 | 12780.1 |
| inner membrane protein | SAMEA3472147_01676 | Not Available | Positive | 1799643 - 1800005 | 13769.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





