Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylglyoxal synthase | SAMEA3472147_01647 | Not Available | Negative | 1772024 - 1772482 | 16919.6 |
| uncharacterized protein conserved in bacteria (duf2057) | SAMEA3472147_01648 | Not Available | Negative | 1772578 - 1773240 | 24595.5 |
| putative coa-binding protein | SAMEA3472147_01649 | Not Available | Positive | 1773413 - 1773826 | 14702.0 |
| dna-binding protein | SAMEA3472147_01650 | Not Available | Negative | 1773871 - 1774188 | 11779.9 |
| putative oxidoreductase | SAMEA3472147_01651 | Not Available | Negative | 1774246 - 1775421 | 43831.8 |
| acylphosphatase | SAMEA3472147_01652 | Not Available | Positive | 1775531 - 1775809 | 10300.3 |
| sulfurtransferase tuse | SAMEA3472147_01653 | Not Available | Negative | 1775806 - 1776135 | 12411.0 |
| putative carrier/transport protein | SAMEA3472147_01654 | Not Available | Negative | 1776226 - 1776885 | 23364.3 |
| Trna-ser | Not Available | Not Available | Positive | 1777092 - 1777179 | Not Available |
| hydrogenase 1, small subunit | SAMEA3472147_01656 | Not Available | Positive | 1777605 - 1778723 | 40683.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





