Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome modulation factor | SAMEA3472147_01637 | Not Available | Positive | 1761168 - 1761335 | 6507.88 |
| 3-hydroxydecanoyl-acp dehydratase | SAMEA3472147_01638 | Not Available | Negative | 1761405 - 1762031 | 23066.3 |
| protease la | SAMEA3472147_01639 | Not Available | Negative | 1761992 - 1763752 | 65802.3 |
| putative dehydrogenase | SAMEA3472147_01640 | Not Available | Positive | 1763938 - 1764390 | 17724.4 |
| outer membrane protein a | SAMEA3472147_01641 | Not Available | Negative | 1764465 - 1765520 | 37713.2 |
| sos cell division inhibitor | SAMEA3472147_01642 | Not Available | Negative | 1765877 - 1766386 | 18802.5 |
| putative dna transformation protein with tfox domain | SAMEA3472147_01643 | Not Available | Positive | 1766605 - 1767234 | 24148.3 |
| membrane protein yccs | SAMEA3472147_01644 | Not Available | Negative | 1767197 - 1769359 | 82006.7 |
| putative inner membrane protein yccf | SAMEA3472147_01645 | Not Available | Negative | 1769369 - 1769815 | 16276.3 |
| dna helicase iv | SAMEA3472147_01646 | Not Available | Positive | 1769938 - 1771992 | 77998.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





