Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | SAMEA3472147_01627 | Not Available | Positive | 1749012 - 1749413 | 14179.6 |
| pili assembly chaperone | SAMEA3472147_01628 | Not Available | Positive | 1749719 - 1750111 | 14480.4 |
| dihydroorotate dehydrogenase 2 | SAMEA3472147_01629 | Not Available | Positive | 1750221 - 1751231 | 36769.8 |
| protein | SAMEA3472147_01630 | Not Available | Positive | 1751405 - 1751947 | 20589.9 |
| putative 2fe-2s iron-sulfur cluster binding protein | SAMEA3472147_01631 | Not Available | Negative | 1751944 - 1753053 | 40694.6 |
| putative rna methylase | SAMEA3472147_01632 | Not Available | Positive | 1753297 - 1755405 | 78716.4 |
| abc transporter atp-binding protein | SAMEA3472147_01633 | Not Available | Positive | 1755417 - 1757324 | 72103.1 |
| paraquat-inducible protein a | SAMEA3472147_01634 | Not Available | Positive | 1757454 - 1758707 | 46466.2 |
| paraquat-inducible protein b | SAMEA3472147_01635 | Not Available | Positive | 1758712 - 1760352 | 60497.0 |
| putative lipoprotein | SAMEA3472147_01636 | Not Available | Positive | 1760349 - 1760912 | 20665.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





