Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| condesin subunit e | SAMEA3472147_01607 | Not Available | Positive | 1721256 - 1721960 | 26976.1 |
| chromosome partition protein | SAMEA3472147_01608 | Not Available | Positive | 1721960 - 1726420 | 170208.0 |
| putative peptidoglycan binding domain-containing protein | SAMEA3472147_01609 | Not Available | Positive | 1726681 - 1728528 | 67874.2 |
| exported protein ycbk | SAMEA3472147_01610 | Not Available | Positive | 1728709 - 1729257 | 20355.6 |
| metal-binding hydrolase | SAMEA3472147_01611 | Not Available | Positive | 1729284 - 1729931 | 23743.4 |
| aspartate aminotransferase | SAMEA3472147_01612 | Not Available | Negative | 1729982 - 1731172 | 43605.8 |
| outer membrane protein f | SAMEA3472147_01613 | Not Available | Negative | 1731357 - 1732445 | 39363.5 |
| asparaginyl-trna synthetase | SAMEA3472147_01614 | Not Available | Negative | 1733046 - 1734446 | 52573.2 |
| nicotinate phosphoribosyltransferase | SAMEA3472147_01615 | Not Available | Negative | 1734615 - 1735817 | 45899.8 |
| aminopeptidase n | SAMEA3472147_01616 | Not Available | Positive | 1736083 - 1738695 | 98879.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





