Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SAMEA3472147_01567 | Not Available | Negative | 1675188 - 1675523 | 12164.6 |
| undecaprenyl phosphate-alpha-4-amino-4-deoxy-l-arabinose arabinosyl transferase | SAMEA3472147_01568 | Not Available | Negative | 1675520 - 1677172 | 62516.8 |
| putative polysaccharide deacetylase | SAMEA3472147_01569 | Not Available | Negative | 1677172 - 1678062 | 33051.5 |
| bifunctional polymyxin resistance protein | SAMEA3472147_01570 | Not Available | Negative | 1678059 - 1680041 | 74181.9 |
| undecaprenyl phosphate 4-deoxy-4-formamido-l-arabinose transferase | SAMEA3472147_01571 | Not Available | Negative | 1680041 - 1681009 | 36357.3 |
| udp-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase | SAMEA3472147_01572 | Not Available | Negative | 1681013 - 1682170 | 42287.0 |
| phosphoglycerate mutase | SAMEA3472147_01573 | Not Available | Positive | 1682460 - 1683062 | 22360.9 |
| nudix-family hydrolase | SAMEA3472147_01574 | Not Available | Negative | 1683101 - 1683526 | 16343.6 |
| outer membrane porin protein | SAMEA3472147_01575 | Not Available | Positive | 1683805 - 1684347 | 18596.8 |
| putative molybdopterin-binding protein | SAMEA3472147_01576 | Not Available | Positive | 1684447 - 1685658 | 44494.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





