Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase chain j | SAMEA3472147_01547 | Not Available | Positive | 1654651 - 1655205 | 19875.9 |
| nadh dehydrogenase i subunit k | SAMEA3472147_01548 | Not Available | Positive | 1655202 - 1655504 | 10845.8 |
| nadh-quinone oxidoreductase subunit l | SAMEA3472147_01549 | Not Available | Positive | 1655501 - 1657342 | 66412.1 |
| nadh dehydrogenase i subunit m | SAMEA3472147_01550 | Not Available | Positive | 1657573 - 1659102 | 56527.9 |
| nadh-quinone oxidoreductase subunit n | SAMEA3472147_01551 | Not Available | Positive | 1659109 - 1660566 | 52075.4 |
| protein | SAMEA3472147_01552 | Not Available | Negative | 1660632 - 1661135 | 19019.8 |
| aminopeptidase | SAMEA3472147_01553 | Not Available | Negative | 1661238 - 1662158 | 33933.1 |
| putative lipoprotein | SAMEA3472147_01554 | Not Available | Positive | 1662347 - 1664074 | 63481.1 |
| deubiquitinase | SAMEA3472147_01555 | Not Available | Negative | 1664606 - 1665364 | 28487.0 |
| ribonuclease bn | SAMEA3472147_01556 | Not Available | Negative | 1665555 - 1666472 | 32965.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





