Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh dehydrogenase operon transcriptional regulator | SAMEA3472147_01537 | Not Available | Positive | 1643906 - 1644844 | 34563.7 |
| uncharacterised protein | SAMEA3472147_01538 | Not Available | Negative | 1645048 - 1645212 | 6476.09 |
| nadh-quinone oxidoreductase subunit a | SAMEA3472147_01539 | Not Available | Positive | 1645475 - 1645918 | 16458.2 |
| nadh dehydrogenase i subunit b | SAMEA3472147_01540 | Not Available | Positive | 1645934 - 1646596 | 25057.3 |
| nadh-quinone oxidoreductase subunit c/d | SAMEA3472147_01541 | Not Available | Positive | 1646690 - 1648492 | 68712.5 |
| nadh-quinone oxidoreductase subunit e | SAMEA3472147_01542 | Not Available | Positive | 1648495 - 1648995 | 18591.1 |
| nadh dehydrogenase i subunit f | SAMEA3472147_01543 | Not Available | Positive | 1648992 - 1650329 | 49295.2 |
| nadh-quinone oxidoreductase subunit g | SAMEA3472147_01544 | Not Available | Positive | 1650382 - 1653108 | 100251.0 |
| nadh dehydrogenase i subunit h | SAMEA3472147_01545 | Not Available | Positive | 1653105 - 1654082 | 36221.3 |
| nadh dehydrogenase i subunit i | SAMEA3472147_01546 | Not Available | Positive | 1654097 - 1654639 | 20538.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





