Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMEA3472147_04379 | Not Available | Positive | 4522469 - 4522807 | 12479.3 |
| Lysozyme | SAMEA3472147_04380 | Not Available | Positive | 4522844 - 4523377 | 19480.4 |
| uncharacterised protein | SAMEA3472147_04381 | Not Available | Positive | 4523570 - 4523716 | 5084.49 |
| Hypothetical protein | SAMEA3472147_04382 | Not Available | Positive | 4523731 - 4523862 | 4640.23 |
| Outer membrane lytic protein rz | SAMEA3472147_04383 | Not Available | Positive | 4523874 - 4524332 | 16531.8 |
| uncharacterised protein | SAMEA3472147_04384 | Not Available | Positive | 4524356 - 4524670 | 11885.4 |
| putative tonb-like membrane protein from phage origin | SAMEA3472147_04385 | Not Available | Positive | 4524915 - 4525241 | 12357.2 |
| Hypothetical protein | SAMEA3472147_04386 | Not Available | Negative | 4525373 - 4525573 | 7638.13 |
| Hypothetical protein | SAMEA3472147_04387 | Not Available | Positive | 4525615 - 4525980 | 13375.0 |
| Putative phage terminase | SAMEA3472147_04388 | Not Available | Positive | 4526268 - 4526831 | 20186.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





